CDS

Accession Number TCMCG042C27386
gbkey CDS
Protein Id XP_016459522.1
Location complement(join(17527..17658,17999..18161,19041..19243,19327..19464,19579..19665,19743..19815,20269..20463,21042..21118,21205..21276,21758..21918,21998..22184,22262..22381,22499..22582,22649..22842,23309..23476,23640..23870,23988..24075,24174..24335,28965..29084))
Gene LOC107783068
GeneID 107783068
Organism Nicotiana tabacum

Protein

Length 884aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016604036.1
Definition PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2 isoform X1 [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category O
Description Zinc finger, C3HC4 type (RING finger)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10696        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006513        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009965        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010016        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010162        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010390        [VIEW IN EMBL-EBI]
GO:0010431        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016574        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022611        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032504        [VIEW IN EMBL-EBI]
GO:0033523        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048609        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071695        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGAATTCTGCTGCTGCATCTGATGAACCTCAAAAGAAGCGTCCTCATCTCAACACTGTTTTAATTTCCTCTCCAACTATGGCTCGCCATTCTAAAGCTTCTTCTGATAATAAAACTGTTGATGCTGCAGTTCTCCATTATCAAAATCAAAAACTAGTTCAGCAGTTAGATGCACAGAAACATAAGTTGTATGATCTTGAAGCCAAAATGAAAGAATTGAGGGACAGACAAGCTTCTTATGATAACTTCTTGGTTAAGTTAAATCGAATCTGGAATCAGCTAGATGATGATCTGATTCTCCTTGGAGCATCCAGTGGTGCAGATCAAATTGCTTTGAAGAGCTTGAATCATCTAGATTATTCTCGAGGTTCAGTTCCATCTTGTCCTGCGGAGGAAATGTTCCTGTGTAGGGTGTTGAAAACCAATGCTATTCCAGGCAACGACAATGCTGGATCCGTTTTGAATATAAGAGAAGCTCTTGATCTGCGTCATTCTTCTACTCTTGAATTGATGAAATCGTTGGAAAATGCTATTGATGCTCAGCGTATTAAAACCGAAAATCTTACTCATGTTTTGGAAGGAAAGCCATCAGCAGAAGATACTGTCATTCTTTTAAGTAAGATCGATGATATGATGAAAGATGAGGCTAATTATCTCCGTCAAGTAATTGATGTTCTTCATTTGAAACACAAAGAATATGCTGATGCAATCGAAGCTTGTAATCAAAGCCATTCAGTGGATCAATCTGAGTTAAAGCGCCTTGAAGGTGAGCTGGAGGAAAGCATGTCAGAACTTGAAGATAGTAGAAGGAAGTTAGTTACGCTGAAAATGCAGAAAGATTTGGCAACTGGGGGGCAGGTAACAGTTTCAAGTGCGGTAAATGGTAGTATGTCGCCAGAGAAGCCTACAGACCGAACAAAAGGTGTGCGGGAACTGAAGGAGTCTATAGAAGAGGCAAAGGCACTGAAAGAGGACCGCCTCTCTGAGCTTCAAGATGCCCAGGAAGATAATCTACATTTGTTAAAGCAGTTGCAAGATCTTCAGAATGAACTAAAGGATGACAGATACGTGTCTTCATCTCGTGCTTATACCTTACTCCATGATCAACGTCACCATTGGAATGCCGAGGCAGAGCGATACAAAGCTCTGACAGACTCTCTTCAGGCTGACAGGTCTTTCATCGTGCGGAGGGAGAAAGAACTGCTTGTGAAAGCAGAGGCTGTGGATTCAGCAAGGAAAGCAGTTGATAACTCCGAGTCAAGGATTGAGGAATTGGAGCATCGCATGCACAGATGCATTATTGAAAAAAATGAGCTGGAAATCAAAATGGAAGAAGCAATCCAAGATGCAGGAAGAAAAGACATTAAAGAGGAGTTTCAGGTGATGGGCTCTGCTTTATCAAAAGAAATACAAATGATGGAAGCTCAGCTGAATCGTTGGAAGGAGACAGCTAAGGAAGCTGTTTCCTTACGTGAAGAAAGACAGTCATTGGAAGCTTCAATAGGACGAAAGGCTATTGAGCACAAAGACTTGATCAATAAATGTGCTCACCAGACTGGGGAGATCCGAACTCTAAAGGAACTTGCTGAGAAGATGCAGAGGGACAAACAGGAACGTCAAATATTCTTGGACATGCTTGGCCAGCAAATCTATGATAACCGAGACATAACGGAAATCAGAGAGTCGGAGAAAAGAGCTCACGCACAAGCTGAAATTCTGAGAGCTGCTTTGAATGAACATGATTTGGAATTGAGAGTGAAAGCTGCTAATGAAGCTGAGGCTGCTTGTCAGCAGAGGCTTTCCGCTGCTGAGGCAGAAATTGCAGAATTGAGGGCAGAACTGGATGCTTCTGACAGAGGTGTTTTAGAGCTAAGAGAAGCGACAAAAATAAAAGAAGGGGAATCAGAAACTTATATTTCCGAGATTGAGACTATTGGTCAAGCCTATGAAGACATGCAGACACAGAACCAACATCTTCTCCAGCAACTGACAGAGAGAGATGATTATAATATAAAGTTAGTTTCTGAGAGCGTGAAGATAAAGCAGGAACAAAGCTTGCTTCTCTCTCGGAAGCAGGTATCAACAGCAAAACTTCAAAAGGCTAAAACATCACTGGAATCTCTGAAAATGAAGATGGCTCAAAGTGAAGACCAGATGAAAGTTCACATCACGGAAGCTTTAAGTTATATCCAAGACGACAGACATCTTGCAGTCACCCTGGAAACTGCTAAGCGAGAATTGGGAGATGCTGATAAGGAATTGAAGTGGCTGAAATCTGCTGCTTCCTCCGCTGACAAGGAATACGAACAGCTCAAGAGAAAGTTGGCCGAAATAGGGGTGGAACTGGGAACTGAAAGGAGTGAGAAAAAGAAGCTTGATGAAGAGGCAGTAGAGTTGAATAGAACTGTTGATGAGTTGACTTCTGCAAGTGGCGAGGCTGCAGTACAAAGACTGCAGGATGAAATCAATGATTGCAAGGCTATTCTAAAATGTGGAGTGTGTCTTGATCGGCCAAAAGAGGTTGTAATCACAAAATGTTATCATCTCTTCTGCAATCCATGTATCCAGAGAAATTTAGAGATCCGTCATCGTAAGTGTCCTGCTTGTGGAGCTGCTTTTGGACAAAACGATGTTCGTTTTGTGAAAATCTGA
Protein:  
MENSAAASDEPQKKRPHLNTVLISSPTMARHSKASSDNKTVDAAVLHYQNQKLVQQLDAQKHKLYDLEAKMKELRDRQASYDNFLVKLNRIWNQLDDDLILLGASSGADQIALKSLNHLDYSRGSVPSCPAEEMFLCRVLKTNAIPGNDNAGSVLNIREALDLRHSSTLELMKSLENAIDAQRIKTENLTHVLEGKPSAEDTVILLSKIDDMMKDEANYLRQVIDVLHLKHKEYADAIEACNQSHSVDQSELKRLEGELEESMSELEDSRRKLVTLKMQKDLATGGQVTVSSAVNGSMSPEKPTDRTKGVRELKESIEEAKALKEDRLSELQDAQEDNLHLLKQLQDLQNELKDDRYVSSSRAYTLLHDQRHHWNAEAERYKALTDSLQADRSFIVRREKELLVKAEAVDSARKAVDNSESRIEELEHRMHRCIIEKNELEIKMEEAIQDAGRKDIKEEFQVMGSALSKEIQMMEAQLNRWKETAKEAVSLREERQSLEASIGRKAIEHKDLINKCAHQTGEIRTLKELAEKMQRDKQERQIFLDMLGQQIYDNRDITEIRESEKRAHAQAEILRAALNEHDLELRVKAANEAEAACQQRLSAAEAEIAELRAELDASDRGVLELREATKIKEGESETYISEIETIGQAYEDMQTQNQHLLQQLTERDDYNIKLVSESVKIKQEQSLLLSRKQVSTAKLQKAKTSLESLKMKMAQSEDQMKVHITEALSYIQDDRHLAVTLETAKRELGDADKELKWLKSAASSADKEYEQLKRKLAEIGVELGTERSEKKKLDEEAVELNRTVDELTSASGEAAVQRLQDEINDCKAILKCGVCLDRPKEVVITKCYHLFCNPCIQRNLEIRHRKCPACGAAFGQNDVRFVKI